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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917947.1_cds_XP_016467498.1_60240
CDS Infomation

[gene=LOC107790109] [db_xref=GeneID:107790109] [protein=glucan endo-1,3-beta-glucosidase 1-like] [protein_id=XP_016467498.1] [location=join(19824..19911,19993..21273,22218..22245,22396..22570)] [gbkey=CDS]
Sequence

ATGGCAAATACTAAAAAGCTCCCTCTTTTCTTCTTTCTTGTTGTCTTTTGCTGCTGCTTC
TCCACATCAATTTCCAGTCTTCTACCAGAAATAAAAGTGCAGCAAGATAAAGATGAACCA
TATGTGGGAGTGAACATAGGTACAGATGTTTCCAATTTTCTATCACCTTCAGACTTGGTT
GCTTTTCTGCAATTACAGAAGATAACACATATAAGGCTTTTTGATGCTGATCCTGATATG
CTCAAAGCATTAGCCAAGACCAAAATCAGAGTCATTATTAGTGTACCTAATAACCAAATT
CTTGCTATTGGTTCTTCTAATACTACTGCAGCTGCCTGGATTGGGCGAAATGTAGCAGCT
TATTACCCTGAAACTCTTATCACAGCAATTGCAGTTGGAGATGAACTCTTGACCACTGTA
CCAAGTTCAGCTCCTTTGCTTATGCCAGCAATTGAGTCACTTTATAGTGCTTTAGTGGCT
GCTAATTTACATACCCAAATCAAGATTTCAACCCCAAATTCTGCTTCCATTATTCTTGAT
CCTTTTCCACCTTCCCAAGCTTTTTTCAATCAGTCCATGAGCTCAGTTCTTTCTCAATTA
TTGCAGTTTTGTTCAAGAACACAGTCACCTTTGATGATGAATTTGTACCCTTACTATGTT
TTTATGCAGAATAAAGGGGTTGTTCCAATAGACAACTCTCTTTTTAAGCCCTTGACACCT
TCTAAAGAGATGGTGGATCCTAATACTTTGCTTCATTACACCAATGTGCTTGATGCTATG
ATTGATTCAGTATATTTTTCCATGAAAAATCTCAATGTTACAGATGTGGTAGTTCTTGTT
ACTGAATCAGGGTGGCCTTCGAAGGGGGATTCTAAAGAGCCTTATGCTACAATTGACAAT
GCTGATACTTATAACTCCAATTTAATTAAGCATATAATTGATCGTAGTGGTACACCGTTG
CATCCGGAAATAACTTCTAGTGTGTACATTTATGAGTTGTTCAATGAGGATTTGAGGTCA
CCCCCTGTGTCCGAGGCAAATTGGGGGCTGTTTCATGGGAATTCGACGCCCGTTTACTTG
CTTCATGTGTCTGGAAGTGGTACATTCTTGGCTAATGACACCACTAATCAAACGTATTGC
ATAGCGATGGATGGGGTCGATAAGAGGACATTGCAAGCTGCTTTGGATTGGGCTTGTGGA
CCGGGGAGGGCAAATTGCTCAGAAATTCAGCCAGGGGAGAGCTGTTATCAGCCTAATGAT
GTGAAGAATCATGCTTCATATGCATTTGATAGCTATTATCAGAAGTCAGGGACATCTCCT
GGTTCTTGTGACTTCAAGGGAGTGGCTATGATCACCACATCTGATCCAAGTCACGGGAGC
TGTATATTTCCAGGAAGCAAGACGGTAAGCAATAAAACAAATCAGGTGGTGAATGCAACA
CAAGCAAGTGGATCAAACACAATAAGATTTATTGGAGCAGAGACAAGTATATTGGACAAG
AATGTGCATGTTTTATTTGGTGTTGCCTTGTGTTTGTTTTATTATTCATTGATTCAGGTA
CACTTAAGTTAG

Peptide Sequence

PEP ID

XP_016467498.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Nicotiana tabacum]
Sequence

MANTKKLPLFFFLVVFCCCFSTSISSLLPEIKVQQDKDEPYVGVNIGTDVSNFLSPSDLV
AFLQLQKITHIRLFDADPDMLKALAKTKIRVIISVPNNQILAIGSSNTTAAAWIGRNVAA
YYPETLITAIAVGDELLTTVPSSAPLLMPAIESLYSALVAANLHTQIKISTPNSASIILD
PFPPSQAFFNQSMSSVLSQLLQFCSRTQSPLMMNLYPYYVFMQNKGVVPIDNSLFKPLTP
SKEMVDPNTLLHYTNVLDAMIDSVYFSMKNLNVTDVVVLVTESGWPSKGDSKEPYATIDN
ADTYNSNLIKHIIDRSGTPLHPEITSSVYIYELFNEDLRSPPVSEANWGLFHGNSTPVYL
LHVSGSGTFLANDTTNQTYCIAMDGVDKRTLQAALDWACGPGRANCSEIQPGESCYQPND
VKNHASYAFDSYYQKSGTSPGSCDFKGVAMITTSDPSHGSCIFPGSKTVSNKTNQVVNAT
QASGSNTIRFIGAETSILDKNVHVLFGVALCLFYYSLIQVHLS

Transcript Sequence

Gene sequence data has not been registered.